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  5. LOC_Os08g20480.1

LOC_Os08g20480.1


Description : Cysteine proteinases superfamily protein


Gene families : OG_01_0001547 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001547_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g20480.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g20480.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_6


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036047 F-box-like_dom_sf SUPERFAMILY 6 66
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 836 1073
IPR003653 Peptidase_C48_C ProSiteProfiles 869 1042
IPR001810 F-box_dom Pfam 8 48
IPR003653 Peptidase_C48_C Pfam 944 1068

No CAZYmes available for this sequence

No external refs found!