LOC_Os08g21330.1

Description : MUTM homolog-1

Gene families : OG_01_0014405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014405_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g21330.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g21330.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_350
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_88

Type	GO Term	Name	Evidence	Source
MF	GO:0000702	oxidized base lesion DNA N-glycosylase activity	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	ISM	GOs from InterProScan
BP	GO:0006284	base-excision repair	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0019104	DNA N-glycosylase activity	ISM	GOs from InterProScan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020629	Formamido-pyr_DNA_Glyclase	TIGRFAM	1	255
IPR012319	FPG_cat	SMART	2	132
IPR015886	DNA_glyclase/AP_lyase_DNA-bd	SMART	146	238
IPR010979	Ribosomal_uS13-like_H2TH	SUPERFAMILY	146	233
IPR015886	DNA_glyclase/AP_lyase_DNA-bd	Pfam	146	235
IPR035937	MutM-like_N-ter	SUPERFAMILY	2	151
IPR035937	MutM-like_N-ter	Gene3D	1	145
IPR012319	FPG_cat	ProSiteProfiles	2	129
IPR012319	FPG_cat	Pfam	1	131

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os08g21330.1

Expression Profile

Co-expression Networks

Functional Annotation