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  5. LOC_Os08g23120.1

LOC_Os08g23120.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0006678 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006678_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g23120.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g23120.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_379
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 96 211
IPR000504 RRM_dom Pfam 105 171
IPR000504 RRM_dom Pfam 17 84
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 14 94
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 103 186
IPR000504 RRM_dom ProSiteProfiles 15 91
IPR000504 RRM_dom ProSiteProfiles 103 182
IPR000504 RRM_dom SMART 16 87
IPR000504 RRM_dom SMART 104 178
IPR035979 RBD_domain_sf SUPERFAMILY 11 93

No CAZYmes available for this sequence

No external refs found!