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  5. LOC_Os08g23150.1

LOC_Os08g23150.1


Description : Aldolase-type TIM barrel family protein


Gene families : OG_01_0000489 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000489_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g23150.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g23150.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_288
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_142


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004425 indole-3-glycerol-phosphate synthase activity ISM GOs from InterProScan
BP GO:0006568 tryptophan metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013798 Indole-3-glycerol_P_synth_dom Hamap 112 379
IPR045186 Indole-3-glycerol_P_synth PANTHER 1 384
IPR013798 Indole-3-glycerol_P_synth_dom CDD 154 377
IPR001468 Indole-3-GlycerolPSynthase_CS ProSitePatterns 166 184
IPR011060 RibuloseP-bd_barrel SUPERFAMILY 121 379
IPR013798 Indole-3-glycerol_P_synth_dom Pfam 114 375
IPR013785 Aldolase_TIM Gene3D 106 382

No CAZYmes available for this sequence

No external refs found!