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  5. Sevir.5G001700.1

Sevir.5G001700.1


Description : SUPPRESSOR OF AUXIN RESISTANCE 3


Gene families : OG_01_0010461 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010461_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G001700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G001700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_211
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_19


Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore ISM GOs from InterProScan
BP GO:0006913 nucleocytoplasmic transport ISM GOs from InterProScan
MF GO:0017056 structural constituent of nuclear pore ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007230 Nup98_auto-Pept-S59_dom Pfam 13 149
IPR037665 Nucleoporin_S59-like PANTHER 8 1004
IPR007230 Nup98_auto-Pept-S59_dom ProSiteProfiles 12 144
IPR021967 Nup98_C Pfam 542 823
IPR036903 Nup98_auto-Pept-S59_dom_sf SUPERFAMILY 6 151
IPR036903 Nup98_auto-Pept-S59_dom_sf Gene3D 8 151

No CAZYmes available for this sequence

No external refs found!