LOC_Os08g25090.1

Description : Co-chaperone GrpE family protein

Gene families : OG_01_0012406 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012406_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g25090.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g25090.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_206

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	ISM	GOs from InterProScan
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	protein-folding chaperone binding	ISM	GOs from InterProScan
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000740	GrpE	CDD	168	317
IPR000740	GrpE	PANTHER	1	330
IPR000740	GrpE	Hamap	83	319
IPR009012	GrpE_head	Gene3D	263	318
IPR000740	GrpE	Pfam	149	318
IPR013805	GrpE_coiled_coil	SUPERFAMILY	156	263
IPR009012	GrpE_head	SUPERFAMILY	264	320
IPR000740	GrpE	ProSitePatterns	274	317
IPR000740	GrpE	PRINTS	298	317
IPR000740	GrpE	PRINTS	271	286
IPR000740	GrpE	PRINTS	175	191
IPR013805	GrpE_coiled_coil	Gene3D	148	262

No CAZYmes available for this sequence

External Links

No external refs found!