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  5. LOC_Os08g28540.1

LOC_Os08g28540.1


Description : HOPZ-ACTIVATED RESISTANCE 1


Gene families : OG_01_0000475 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000475_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g28540.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g28540.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_105
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_280


Type GO Term Name Evidence Source
BP GO:0006952 defense response ISM GOs from InterProScan
MF GO:0043531 ADP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase SUPERFAMILY 160 432
IPR044974 Disease_R_plants PANTHER 1 905
IPR027417 P-loop_NTPase Gene3D 147 321
IPR002182 NB-ARC Pfam 174 418
IPR032675 LRR_dom_sf Gene3D 514 890
IPR041118 Rx_N Pfam 12 97
IPR042197 Apaf_helical Gene3D 331 417
IPR038005 RX-like_CC CDD 9 128
IPR036388 WH-like_DNA-bd_sf Gene3D 418 504

No CAZYmes available for this sequence

No external refs found!