LOC_Os08g28570.1

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_01_0002044 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002044_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g28570.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g28570.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_45

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042197	Apaf_helical	Gene3D	286	372
IPR044974	Disease_R_plants	PANTHER	143	811
IPR044974	Disease_R_plants	PANTHER	1	138
IPR032675	LRR_dom_sf	Gene3D	487	858
IPR027417	P-loop_NTPase	SUPERFAMILY	146	387
IPR027417	P-loop_NTPase	Gene3D	118	276
IPR041118	Rx_N	Pfam	12	95
IPR002182	NB-ARC	Pfam	146	373
IPR036388	WH-like_DNA-bd_sf	Gene3D	373	458
IPR038005	RX-like_CC	CDD	9	131

No CAZYmes available for this sequence

External Links

No external refs found!