1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g33200.1

LOC_Os08g33200.1


Description : FORMS APLOID AND BINUCLEATE CELLS 1C


Gene families : OG_01_0005358 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005358_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g33200.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g33200.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_53
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_138


Type GO Term Name Evidence Source
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
BP GO:0046488 phosphatidylinositol metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044769 PIKfyve_PIPKc CDD 1361 1621
IPR002498 PInositol-4-P-4/5-kinase_core ProSiteProfiles 1303 1621
IPR002498 PInositol-4-P-4/5-kinase_core SMART 1334 1622
IPR027484 PInositol-4-P-5-kinase_N Gene3D 1308 1481
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 328 498
IPR002498 PInositol-4-P-4/5-kinase_core Pfam 1400 1563
IPR027409 GroEL-like_apical_dom_sf Gene3D 327 498
IPR002423 Cpn60/GroEL/TCP-1 Pfam 283 518

No CAZYmes available for this sequence

No external refs found!