LOC_Os08g33880.1

Description : A20/AN1-like zinc finger family protein

Gene families : OG_01_0005029 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005029_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g33880.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g33880.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_177
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_264

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000058	Znf_AN1	Pfam	167	201
IPR002653	Znf_A20	ProSiteProfiles	75	109
IPR000058	Znf_AN1	SMART	165	202
IPR000058	Znf_AN1	ProSiteProfiles	162	205
IPR002653	Znf_A20	Pfam	80	102
IPR002653	Znf_A20	Pfam	19	42
IPR035896	AN1-like_Znf	SUPERFAMILY	154	219
IPR002653	Znf_A20	ProSiteProfiles	15	49
IPR035896	AN1-like_Znf	Gene3D	139	219
IPR002653	Znf_A20	SMART	18	42
IPR002653	Znf_A20	SMART	78	102

No CAZYmes available for this sequence

External Links

No external refs found!