LOC_Os08g34310.1

Description : RNA recognition motif (RRM)-containing protein

Gene families : OG_01_0017516 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017516_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g34310.1	No neighbors in network
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g34310.1
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_187

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	SMART	361	385
IPR013087	Znf_C2H2_type	SMART	422	446
IPR036236	Znf_C2H2_sf	SUPERFAMILY	406	450
IPR013087	Znf_C2H2_type	ProSitePatterns	424	446
IPR036236	Znf_C2H2_sf	SUPERFAMILY	354	394
IPR003604	Matrin/U1-like-C_Znf_C2H2	SMART	353	392
IPR003604	Matrin/U1-like-C_Znf_C2H2	SMART	419	453

No CAZYmes available for this sequence

External Links

No external refs found!