Sevir.5G007400.1

Description : Predicted eukaryotic LigT

Gene families : OG_01_0001354 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001354_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G007400.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G007400.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019510	AKAP7-like_phosphoesterase	Pfam	252	515
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	160	234
IPR004087	KH_dom	SMART	159	227
IPR009097	Cyclic_Pdiesterase	SUPERFAMILY	344	515
IPR036612	KH_dom_type_1_sf	Gene3D	153	236
IPR004088	KH_dom_type_1	Pfam	164	223
IPR009210	ASCC1	PANTHER	65	516

No CAZYmes available for this sequence

External Links

No external refs found!