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  5. LOC_Os08g35210.1

LOC_Os08g35210.1


Description : Riboflavin synthase-like superfamily protein


Gene families : OG_01_0002179 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002179_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g35210.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g35210.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_294
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_103


Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR039261 FNR_nucleotide-bd Gene3D 824 1033
IPR000778 Cyt_b245_heavy_chain PRINTS 557 575
IPR000778 Cyt_b245_heavy_chain PRINTS 651 671
IPR000778 Cyt_b245_heavy_chain PRINTS 838 855
IPR013121 Fe_red_NAD-bd_6 Pfam 833 1015
IPR017938 Riboflavin_synthase-like_b-brl SUPERFAMILY 711 826
IPR017927 FAD-bd_FR_type ProSiteProfiles 708 829
IPR013623 NADPH_Ox Pfam 259 298
IPR013623 NADPH_Ox Pfam 172 231
IPR039261 FNR_nucleotide-bd SUPERFAMILY 830 1033
IPR013130 Fe3_Rdtase_TM_dom Pfam 557 669
IPR013112 FAD-bd_8 Pfam 712 826
IPR011992 EF-hand-dom_pair SUPERFAMILY 203 356

No CAZYmes available for this sequence

No external refs found!