Sevir.5G008700.1

Description : RNA polymerase I-associated factor PAF67

Gene families : OG_01_0009019 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009019_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.5G008700.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.5G008700.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_123
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_16

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019382	eIF3l	Pfam	111	507
IPR000717	PCI_dom	ProSiteProfiles	295	494
IPR019382	eIF3l	Hamap	21	509
IPR019382	eIF3l	PANTHER	19	520

No CAZYmes available for this sequence

External Links

No external refs found!