LOC_Os08g37904.2

Description : methyl-CPG-binding domain 8

Gene families : OG_01_0003599 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003599_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g37904.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g37904.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_267
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_140

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	ProSitePatterns	363	383
IPR013087	Znf_C2H2_type	SMART	312	335
IPR013087	Znf_C2H2_type	SMART	361	383
IPR013087	Znf_C2H2_type	ProSitePatterns	314	335
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	186	259
IPR001739	Methyl_CpG_DNA-bd	Pfam	196	239
IPR013087	Znf_C2H2_type	ProSiteProfiles	361	388
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	190	241
IPR037472	MBD8	PANTHER	1	704

No CAZYmes available for this sequence

External Links

No external refs found!