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Description : elongator protein 2
Gene families : OG_01_0009305 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009305_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g38570.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g38570.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_198 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_1 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 714 | 728 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 97 | 111 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 256 | 270 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 586 | 684 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 29 | 291 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 419 | 450 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 229 | 278 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 695 | 736 |
| IPR001680 | WD40_rpt | Pfam | 413 | 450 |
| IPR001680 | WD40_rpt | Pfam | 229 | 269 |
| IPR001680 | WD40_rpt | Pfam | 644 | 678 |
| IPR001680 | WD40_rpt | Pfam | 128 | 160 |
| IPR001680 | WD40_rpt | Pfam | 692 | 727 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 467 | 847 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 685 | 848 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 647 | 681 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 87 | 500 |
| IPR001680 | WD40_rpt | SMART | 119 | 160 |
| IPR001680 | WD40_rpt | SMART | 688 | 727 |
| IPR001680 | WD40_rpt | SMART | 640 | 679 |
| IPR001680 | WD40_rpt | SMART | 60 | 110 |
| IPR001680 | WD40_rpt | SMART | 796 | 845 |
| IPR001680 | WD40_rpt | SMART | 733 | 777 |
| IPR001680 | WD40_rpt | SMART | 306 | 355 |
| IPR001680 | WD40_rpt | SMART | 222 | 269 |
| IPR001680 | WD40_rpt | SMART | 593 | 637 |
| IPR001680 | WD40_rpt | SMART | 412 | 451 |
| IPR001680 | WD40_rpt | SMART | 461 | 505 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 415 | 539 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 297 | 414 |
No CAZYmes available for this sequence
| No external refs found! |