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  5. LOC_Os08g39060.1

LOC_Os08g39060.1


Description : RNI-like superfamily protein


Gene families : OG_01_0006559 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006559_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g39060.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g39060.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_750


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001611 Leu-rich_rpt Pfam 400 424
IPR001611 Leu-rich_rpt Pfam 427 447
IPR032675 LRR_dom_sf Gene3D 57 477
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 401 426
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 325 350
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 452 476
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 291 324
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 115 140
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 427 450
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 507 532
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 174 201
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 481 506

No CAZYmes available for this sequence

No external refs found!