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Description : lipoxygenase 2
Gene families : OG_01_0015626 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015626_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g39840.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g39840.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_87 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_5 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 327 | 418 |
| IPR001024 | PLAT/LH2_dom | SMART | 88 | 223 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 227 | 924 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 85 | 226 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 91 | 223 |
| IPR001024 | PLAT/LH2_dom | Pfam | 124 | 221 |
| IPR000907 | LipOase | PANTHER | 83 | 923 |
| IPR013819 | LipOase_C | PRINTS | 596 | 616 |
| IPR013819 | LipOase_C | PRINTS | 558 | 575 |
| IPR013819 | LipOase_C | PRINTS | 576 | 593 |
| IPR020834 | LipOase_CS | ProSitePatterns | 603 | 613 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 576 | 590 |
| IPR013819 | LipOase_C | Pfam | 234 | 907 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 88 | 218 |
| IPR013819 | LipOase_C | ProSiteProfiles | 225 | 924 |
| IPR001246 | LipOase_plant | PRINTS | 290 | 309 |
| IPR001246 | LipOase_plant | PRINTS | 837 | 851 |
| IPR001246 | LipOase_plant | PRINTS | 513 | 537 |
| IPR001246 | LipOase_plant | PRINTS | 218 | 239 |
| IPR001246 | LipOase_plant | PRINTS | 406 | 422 |
| IPR001246 | LipOase_plant | PRINTS | 257 | 273 |
| IPR001246 | LipOase_plant | PRINTS | 358 | 379 |
| IPR001246 | LipOase_plant | PRINTS | 445 | 464 |
| IPR001246 | LipOase_plant | PRINTS | 188 | 206 |
No CAZYmes available for this sequence
| No external refs found! |