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  5. LOC_Os08g39980.1

LOC_Os08g39980.1


Description : DNA-binding bromodomain-containing protein


Gene families : OG_01_0013955 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013955_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g39980.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g39980.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_374
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036427 Bromodomain-like_sf SUPERFAMILY 293 404
IPR001487 Bromodomain ProSiteProfiles 310 388
IPR001005 SANT/Myb SMART 26 82
IPR017930 Myb_dom Pfam 30 77
IPR001005 SANT/Myb CDD 30 79
IPR009057 Homeobox-like_sf SUPERFAMILY 27 82
IPR036427 Bromodomain-like_sf Gene3D 295 409
IPR001005 SANT/Myb ProSiteProfiles 30 80
IPR001487 Bromodomain SMART 291 407
IPR001487 Bromodomain Pfam 310 391

No CAZYmes available for this sequence

No external refs found!