LOC_Os08g40930.1

Description : isoamylase 1

Gene families : OG_01_0008298 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008298_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g40930.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g40930.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013783	Ig-like_fold	Gene3D	89	225
IPR013780	Glyco_hydro_b	Gene3D	694	803
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	228	684
IPR006047	Glyco_hydro_13_cat_dom	SMART	249	678
IPR014756	Ig_E-set	SUPERFAMILY	99	237
IPR004193	Glyco_hydro_13_N	Pfam	103	197
IPR006047	Glyco_hydro_13_cat_dom	Pfam	267	438
IPR044505	GlgX_Isoamylase_N_E_set	CDD	103	249

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM48	76	804	2e-14	102	200

External Links

No external refs found!