LOC_Os08g42670.2

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG_01_0000043 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000043_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g42670.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g42670.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_39

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	Gene3D	382	542
IPR032675	LRR_dom_sf	Gene3D	774	1193
IPR042197	Apaf_helical	Gene3D	549	638
IPR027417	P-loop_NTPase	SUPERFAMILY	200	344
IPR027417	P-loop_NTPase	Gene3D	159	331
IPR044974	Disease_R_plants	PANTHER	385	1199
IPR044974	Disease_R_plants	PANTHER	166	318
IPR002182	NB-ARC	Pfam	203	344
IPR002182	NB-ARC	Pfam	409	640
IPR038005	RX-like_CC	CDD	9	125
IPR041118	Rx_N	Pfam	13	94
IPR027417	P-loop_NTPase	SUPERFAMILY	392	653
IPR044974	Disease_R_plants	PANTHER	4	143
IPR036388	WH-like_DNA-bd_sf	Gene3D	639	732

No CAZYmes available for this sequence

External Links

No external refs found!