LOC_Os08g42740.3

Description : IBR domain-containing protein

Gene families : OG_01_0000742 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000742_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os08g42740.3
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os08g42740.3
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_201

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045840	Ariadne	Pfam	372	492
IPR002867	IBR_dom	Pfam	302	350
IPR002867	IBR_dom	Pfam	225	285
IPR002867	IBR_dom	SMART	298	359
IPR002867	IBR_dom	SMART	224	285
IPR013083	Znf_RING/FYVE/PHD	Gene3D	149	239
IPR031127	E3_UB_ligase_RBR	PANTHER	18	554
IPR001876	Znf_RanBP2	ProSitePatterns	583	602
IPR001841	Znf_RING	ProSiteProfiles	155	201
IPR001876	Znf_RanBP2	SMART	581	605
IPR036443	Znf_RanBP2_sf	SUPERFAMILY	578	606
IPR044066	TRIAD_supradom	ProSiteProfiles	151	363

No CAZYmes available for this sequence

External Links

No external refs found!