LOC_Os09g07300.1

Description : auxin transport protein (BIG)

Gene families : OG_01_0008775 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008775_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g07300.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g07300.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_198
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000433	Znf_ZZ	ProSitePatterns	2609	2636
IPR025704	E3_Ub_ligase_UBR4_C	Pfam	4175	4322
IPR043145	Znf_ZZ_sf	Gene3D	2599	2663
IPR000433	Znf_ZZ	Pfam	2606	2638
IPR016024	ARM-type_fold	SUPERFAMILY	3659	4027
IPR045189	UBR4-like	PANTHER	267	4322
IPR000433	Znf_ZZ	ProSiteProfiles	2603	2637
IPR003126	Znf_UBR	SMART	1593	1665
IPR000433	Znf_ZZ	SMART	2603	2646
IPR003126	Znf_UBR	ProSiteProfiles	1593	1664

No CAZYmes available for this sequence

External Links

No external refs found!