LOC_Os09g08730.1

Description : pumilio 2

Gene families : OG_01_0021544 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021544_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g08730.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g08730.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_13
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_5

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	198	311
IPR033133	PUM-HD	ProSiteProfiles	193	332
IPR016024	ARM-type_fold	SUPERFAMILY	205	310
IPR001313	Pumilio_RNA-bd_rpt	Pfam	257	278
IPR001313	Pumilio_RNA-bd_rpt	Pfam	293	306
IPR001313	Pumilio_RNA-bd_rpt	Pfam	221	254
IPR001313	Pumilio_RNA-bd_rpt	SMART	217	252
IPR001313	Pumilio_RNA-bd_rpt	SMART	253	289
IPR001313	Pumilio_RNA-bd_rpt	ProSiteProfiles	253	288
IPR001313	Pumilio_RNA-bd_rpt	ProSiteProfiles	217	252

No CAZYmes available for this sequence

External Links

No external refs found!