LOC_Os09g10930.2

Description : SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein

Gene families : OG_01_0001587 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001587_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g10930.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g10930.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_105

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000467	G_patch_dom	SMART	346	393
IPR040169	SUGP1/2	PANTHER	3	431
IPR000467	G_patch_dom	Pfam	349	392
IPR000061	Surp	ProSiteProfiles	148	191
IPR000061	Surp	SMART	146	200
IPR000061	Surp	Pfam	147	197
IPR000467	G_patch_dom	ProSiteProfiles	348	395
IPR035967	SWAP/Surp_sf	SUPERFAMILY	135	202
IPR035967	SWAP/Surp_sf	Gene3D	133	200

No CAZYmes available for this sequence

External Links

No external refs found!