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  5. LOC_Os09g12350.1

LOC_Os09g12350.1


Description : Ankyrin repeat family protein


Gene families : OG_01_0007569 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007569_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g12350.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g12350.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_226


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt ProSiteProfiles 265 291
IPR002110 Ankyrin_rpt SMART 199 228
IPR002110 Ankyrin_rpt SMART 104 134
IPR002110 Ankyrin_rpt SMART 265 297
IPR002110 Ankyrin_rpt SMART 163 193
IPR002110 Ankyrin_rpt SMART 376 405
IPR026961 PGG_dom Pfam 475 588
IPR002110 Ankyrin_rpt Pfam 104 125
IPR002110 Ankyrin_rpt Pfam 266 291
IPR002110 Ankyrin_rpt Pfam 152 221
IPR036770 Ankyrin_rpt-contain_sf Gene3D 145 252
IPR036770 Ankyrin_rpt-contain_sf Gene3D 1 136
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 322 427
IPR002110 Ankyrin_rpt ProSiteProfiles 104 136
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 5 353
IPR036770 Ankyrin_rpt-contain_sf Gene3D 254 429
IPR002110 Ankyrin_rpt Pfam 371 418

No CAZYmes available for this sequence

No external refs found!