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  5. LOC_Os09g16200.1

LOC_Os09g16200.1


Description : Ankyrin repeat family protein


Gene families : OG_01_0190870 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g16200.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g16200.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_20
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_261


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 19 238
IPR026961 PGG_dom Pfam 456 501
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 66 400
IPR002110 Ankyrin_rpt Pfam 267 330
IPR002110 Ankyrin_rpt Pfam 141 207
IPR036770 Ankyrin_rpt-contain_sf Gene3D 252 444
IPR002110 Ankyrin_rpt SMART 148 181
IPR002110 Ankyrin_rpt SMART 344 377
IPR002110 Ankyrin_rpt SMART 381 411
IPR002110 Ankyrin_rpt SMART 309 339
IPR002110 Ankyrin_rpt SMART 186 215
IPR002110 Ankyrin_rpt SMART 276 305
IPR002110 Ankyrin_rpt ProSiteProfiles 186 218

No CAZYmes available for this sequence

No external refs found!