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  5. LOC_Os09g16550.1

LOC_Os09g16550.1


Description : Ankyrin repeat family protein


Gene families : OG_01_0128636 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0128636_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g16550.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g16550.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_5


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR026961 PGG_dom Pfam 489 592
IPR036770 Ankyrin_rpt-contain_sf Gene3D 68 499
IPR020846 MFS_dom ProSiteProfiles 582 687
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 202 448
IPR002110 Ankyrin_rpt SMART 164 193
IPR002110 Ankyrin_rpt SMART 304 334
IPR002110 Ankyrin_rpt SMART 123 152
IPR002110 Ankyrin_rpt SMART 372 401
IPR002110 Ankyrin_rpt SMART 408 438
IPR002110 Ankyrin_rpt SMART 338 367
IPR002110 Ankyrin_rpt SMART 271 299
IPR002110 Ankyrin_rpt SMART 440 470
IPR002110 Ankyrin_rpt SMART 205 234
IPR002110 Ankyrin_rpt ProSiteProfiles 205 226
IPR002110 Ankyrin_rpt Pfam 374 426
IPR002110 Ankyrin_rpt Pfam 128 226
IPR002110 Ankyrin_rpt Pfam 304 359
IPR002110 Ankyrin_rpt ProSiteProfiles 338 360

No CAZYmes available for this sequence

No external refs found!