LOC_Os09g19940.1

Description : CwfJ-like family protein / zinc finger (CCCH-type) family protein

Gene families : OG_01_0004174 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004174_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g19940.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g19940.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR040194	Cwf19-like	PANTHER	13	612
IPR036265	HIT-like_sf	Gene3D	378	508
IPR036855	Znf_CCCH_sf	SUPERFAMILY	322	348
IPR006768	Cwf19-like_C_dom-1	Pfam	389	506
IPR000571	Znf_CCCH	ProSiteProfiles	318	346
IPR000571	Znf_CCCH	ProSiteProfiles	351	378
IPR006767	Cwf19-like_C_dom-2	Pfam	532	610
IPR000571	Znf_CCCH	SMART	320	345
IPR000571	Znf_CCCH	SMART	350	377
IPR036265	HIT-like_sf	SUPERFAMILY	397	487
IPR036855	Znf_CCCH_sf	SUPERFAMILY	350	379

No CAZYmes available for this sequence

External Links

No external refs found!