LOC_Os09g20560.1

Description : pumilio 7

Gene families : OG_01_0024387 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0024387_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g20560.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g20560.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_21

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	191	495
IPR033133	PUM-HD	ProSiteProfiles	153	495
IPR016024	ARM-type_fold	SUPERFAMILY	203	492
IPR001313	Pumilio_RNA-bd_rpt	Pfam	365	392
IPR001313	Pumilio_RNA-bd_rpt	Pfam	399	432
IPR001313	Pumilio_RNA-bd_rpt	Pfam	327	360
IPR001313	Pumilio_RNA-bd_rpt	SMART	395	430
IPR001313	Pumilio_RNA-bd_rpt	SMART	434	469
IPR001313	Pumilio_RNA-bd_rpt	SMART	359	394
IPR001313	Pumilio_RNA-bd_rpt	SMART	287	322
IPR001313	Pumilio_RNA-bd_rpt	SMART	323	358
IPR001313	Pumilio_RNA-bd_rpt	ProSiteProfiles	390	435

No CAZYmes available for this sequence

External Links

No external refs found!