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  5. LOC_Os09g25650.1

LOC_Os09g25650.1


Description : gamete expressed 2


Gene families : OG_01_0026911 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0026911_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g25650.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g25650.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_333
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_131


Type GO Term Name Evidence Source
BP GO:0030036 actin cytoskeleton organization ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017868 Filamin/ABP280_repeat-like Pfam 524 604
IPR017868 Filamin/ABP280_repeat-like Pfam 362 488
IPR017868 Filamin/ABP280_repeat-like ProSiteProfiles 126 249
IPR017868 Filamin/ABP280_repeat-like ProSiteProfiles 569 607
IPR014756 Ig_E-set SUPERFAMILY 360 499
IPR014756 Ig_E-set SUPERFAMILY 143 255
IPR013783 Ig-like_fold Gene3D 509 608
IPR013783 Ig-like_fold Gene3D 140 254
IPR013783 Ig-like_fold Gene3D 362 503
IPR017868 Filamin/ABP280_repeat-like ProSiteProfiles 360 498
IPR014756 Ig_E-set SUPERFAMILY 518 617
IPR044801 Filamin PANTHER 24 139
IPR044801 Filamin PANTHER 185 1064

No CAZYmes available for this sequence

No external refs found!