LOC_Os09g27420.1

Description : 10-formyltetrahydrofolate synthetase

Gene families : OG_01_0008359 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008359_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g27420.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g27420.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_47
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_159

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004329	formate-tetrahydrofolate ligase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000559	Formate_THF_ligase	Hamap	87	707
IPR027417	P-loop_NTPase	SUPERFAMILY	90	704
IPR000559	Formate_THF_ligase	CDD	102	706
IPR027417	P-loop_NTPase	Gene3D	342	593
IPR027417	P-loop_NTPase	Gene3D	86	238
IPR020628	Formate_THF_ligase_CS	ProSitePatterns	190	200
IPR000559	Formate_THF_ligase	Pfam	89	707
IPR020628	Formate_THF_ligase_CS	ProSitePatterns	470	481

No CAZYmes available for this sequence

External Links

No external refs found!