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  5. LOC_Os09g28810.1

LOC_Os09g28810.1


Description : RNA-binding protein 47C


Gene families : OG_01_0013047 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013047_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g28810.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g28810.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_135
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_161


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 18 98
IPR035979 RBD_domain_sf SUPERFAMILY 208 306
IPR000504 RRM_dom Pfam 21 87
IPR000504 RRM_dom Pfam 114 179
IPR000504 RRM_dom Pfam 216 279
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 100 204
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 205 294
IPR000504 RRM_dom ProSiteProfiles 19 99
IPR000504 RRM_dom ProSiteProfiles 214 286
IPR000504 RRM_dom ProSiteProfiles 112 191
IPR000504 RRM_dom SMART 215 282
IPR000504 RRM_dom SMART 113 187
IPR000504 RRM_dom SMART 20 95
IPR035979 RBD_domain_sf SUPERFAMILY 16 194

No CAZYmes available for this sequence

No external refs found!