LOC_Os09g31025.1

Description : Calcium-binding EF-hand family protein

Gene families : OG_01_0012047 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012047_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g31025.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g31025.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_59
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_149

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002048	EF_hand_dom	SMART	24	52
IPR002048	EF_hand_dom	SMART	76	104
IPR011992	EF-hand-dom_pair	SUPERFAMILY	29	101
IPR002048	EF_hand_dom	Pfam	28	45
IPR002048	EF_hand_dom	Pfam	80	99
IPR002048	EF_hand_dom	ProSiteProfiles	72	107
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	33	45

No CAZYmes available for this sequence

External Links

No external refs found!