LOC_Os09g31470.1

Description : AT hook motif DNA-binding family protein

Gene families : OG_01_0003422 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003422_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g31470.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g31470.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005175	PPC_dom	Pfam	175	289
IPR005175	PPC_dom	CDD	174	288
IPR005175	PPC_dom	ProSiteProfiles	169	313
IPR039605	AHL	PANTHER	21	353
IPR017956	AT_hook_DNA-bd_motif	SMART	90	102
IPR017956	AT_hook_DNA-bd_motif	SMART	143	155

No CAZYmes available for this sequence

External Links

No external refs found!