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  5. LOC_Os09g32300.1

LOC_Os09g32300.1


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0008069 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008069_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g32300.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g32300.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036612 KH_dom_type_1_sf SUPERFAMILY 103 186
IPR036612 KH_dom_type_1_sf SUPERFAMILY 321 404
IPR004088 KH_dom_type_1 Pfam 329 396
IPR004088 KH_dom_type_1 Pfam 544 606
IPR004088 KH_dom_type_1 Pfam 112 178
IPR004088 KH_dom_type_1 Pfam 246 295
IPR036612 KH_dom_type_1_sf Gene3D 242 320
IPR036612 KH_dom_type_1_sf Gene3D 324 403
IPR036612 KH_dom_type_1_sf SUPERFAMILY 542 609
IPR036612 KH_dom_type_1_sf Gene3D 539 610
IPR036612 KH_dom_type_1_sf Gene3D 108 187
IPR004087 KH_dom SMART 540 610
IPR004087 KH_dom SMART 107 183
IPR004087 KH_dom SMART 326 401
IPR004087 KH_dom SMART 242 318
IPR036612 KH_dom_type_1_sf SUPERFAMILY 244 321

No CAZYmes available for this sequence

No external refs found!