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  5. LOC_Os09g33600.1

LOC_Os09g33600.1


Description : ARF GTPase-activating protein


Gene families : OG_01_0000806 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000806_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g33600.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g33600.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_361
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 729 829
IPR004148 BAR_dom SMART 11 218
IPR001849 PH_domain Pfam 294 426
IPR002110 Ankyrin_rpt ProSiteProfiles 742 774
IPR001164 ArfGAP_dom SMART 500 645
IPR002110 Ankyrin_rpt Pfam 747 829
IPR001164 ArfGAP_dom Pfam 504 639
IPR001164 ArfGAP_dom ProSiteProfiles 500 645
IPR036770 Ankyrin_rpt-contain_sf Gene3D 724 834
IPR002110 Ankyrin_rpt SMART 742 771
IPR002110 Ankyrin_rpt SMART 775 804
IPR002110 Ankyrin_rpt ProSiteProfiles 775 807
IPR038508 ArfGAP_dom_sf Gene3D 482 645
IPR027267 AH/BAR_dom_sf Gene3D 2 250
IPR001164 ArfGAP_dom PRINTS 512 531
IPR001164 ArfGAP_dom PRINTS 531 548
IPR001164 ArfGAP_dom PRINTS 554 575
IPR037278 ARFGAP/RecO SUPERFAMILY 501 640
IPR001849 PH_domain SMART 293 429
IPR027267 AH/BAR_dom_sf SUPERFAMILY 5 315
IPR001849 PH_domain ProSiteProfiles 292 427
IPR045258 ACAP1/2/3-like PANTHER 1 833
IPR011993 PH-like_dom_sf Gene3D 285 439
IPR035670 AGD1/2/3/4_BAR_plant CDD 14 215

No CAZYmes available for this sequence

No external refs found!