LOC_Os09g36300.1

Description : lon protease 2

Gene families : OG_01_0005702 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005702_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g36300.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g36300.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_337
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_114

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	ISM	GOs from InterProScan
MF	GO:0004252	serine-type endopeptidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	ISM	GOs from InterProScan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	691	876
IPR003959	ATPase_AAA_core	Pfam	404	541
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	692	872
IPR003593	AAA+_ATPase	SMART	400	545
IPR008268	Peptidase_S16_AS	ProSitePatterns	777	785
IPR027417	P-loop_NTPase	SUPERFAMILY	353	620
IPR004815	Lon_bac/euk-typ	PIRSF	2	637
IPR004815	Lon_bac/euk-typ	PIRSF	652	875
IPR008269	Lon_proteolytic	Pfam	666	873
IPR027065	Lon_Prtase	PANTHER	1	884
IPR008269	Lon_proteolytic	ProSiteProfiles	689	874
IPR003111	Lon_prtase_N	ProSiteProfiles	12	253
IPR003111	Lon_prtase_N	SMART	11	253
IPR015947	PUA-like_sf	SUPERFAMILY	11	252
IPR003111	Lon_prtase_N	Pfam	12	253
IPR004815	Lon_bac/euk-typ	TIGRFAM	14	872
IPR027417	P-loop_NTPase	Gene3D	365	543
IPR027501	Lonp2_euk	Hamap	4	884

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os09g36300.1

Expression Profile

Co-expression Networks

Functional Annotation