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  5. LOC_Os09g37860.1

LOC_Os09g37860.1


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG_01_0000528 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000528_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g37860.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g37860.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
BP GO:0006396 RNA processing ISM GOs from InterProScan
MF GO:0008168 methyltransferase activity ISM GOs from InterProScan
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001678 MeTrfase_RsmB-F_NOP2_dom ProSiteProfiles 257 546
IPR001678 MeTrfase_RsmB-F_NOP2_dom Pfam 334 544
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 230 545
IPR031341 Methyltr_RsmF_N Pfam 246 330
IPR011023 Nop2p TIGRFAM 269 545
IPR023267 RCMT PRINTS 468 484
IPR023267 RCMT PRINTS 414 426
IPR023267 RCMT PRINTS 317 331
IPR023267 RCMT PRINTS 528 545
IPR023267 RCMT PRINTS 346 356
IPR023273 RCMT_NOP2 PRINTS 253 265
IPR023273 RCMT_NOP2 PRINTS 276 289
IPR023273 RCMT_NOP2 PRINTS 220 240
IPR023267 RCMT PANTHER 52 553
IPR018314 Fmu/NOL1/Nop2p_CS ProSitePatterns 413 424

No CAZYmes available for this sequence

No external refs found!