LOC_Os09g38320.1

Description : PHYTOENE SYNTHASE

Gene families : OG_01_0000220 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000220_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g38320.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g38320.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_87
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_207

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004311	farnesyltranstransferase activity	ISM	GOs from InterProScan
MF	GO:0004659	prenyltransferase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044843	Trans_IPPS_bact-type	SFLD	146	427
IPR002060	Squ/phyt_synthse	Pfam	158	414
IPR002060	Squ/phyt_synthse	SFLD	146	427
IPR019845	Squalene/phytoene_synthase_CS	ProSitePatterns	303	328
IPR008949	Isoprenoid_synthase_dom_sf	SUPERFAMILY	148	431
IPR008949	Isoprenoid_synthase_dom_sf	Gene3D	140	427
IPR033904	Trans_IPPS_HH	CDD	150	417

No CAZYmes available for this sequence

External Links

No external refs found!