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  5. LOC_Os09g38440.1

LOC_Os09g38440.1


Description : homologue of trithorax


Gene families : OG_01_0012320 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012320_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g38440.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g38440.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_25
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 368 478
IPR011011 Znf_FYVE_PHD SUPERFAMILY 219 273
IPR013083 Znf_RING/FYVE/PHD Gene3D 210 276
IPR001214 SET_dom SMART 565 692
IPR001214 SET_dom ProSiteProfiles 565 686
IPR003616 Post-SET_dom ProSiteProfiles 694 710
IPR019787 Znf_PHD-finger ProSiteProfiles 221 271
IPR034732 EPHD ProSiteProfiles 353 479
IPR001965 Znf_PHD SMART 223 269
IPR001965 Znf_PHD SMART 423 479
IPR001214 SET_dom Pfam 576 685

No CAZYmes available for this sequence

No external refs found!