LOC_Os09g38790.1

Description : zinc finger (C2H2 type) family protein

Gene families : OG_01_0001027 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001027_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os09g38790.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os09g38790.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_29

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	ProSitePatterns	37	58
IPR013087	Znf_C2H2_type	SMART	11	34
IPR013087	Znf_C2H2_type	SMART	35	58
IPR003656	Znf_BED	ProSiteProfiles	6	65
IPR013087	Znf_C2H2_type	ProSitePatterns	13	34

No CAZYmes available for this sequence

External Links

No external refs found!