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  5. LOC_Os10g05088.1

LOC_Os10g05088.1


Description : SGNH hydrolase-type esterase superfamily protein


Gene families : OG_01_0048903 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0048903_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g05088.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g05088.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_224
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_204


Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process ISM GOs from InterProScan
MF GO:0016298 lipase activity ISM GOs from InterProScan
MF GO:0016788 hydrolase activity, acting on ester bonds ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008265 Lipase_GDSL_AS ProSitePatterns 40 51
IPR035669 SGNH_plant_lipase-like CDD 38 342
IPR036514 SGNH_hydro_sf Gene3D 30 345
IPR001087 GDSL Pfam 40 340
HMM Family HMM Length Query Length e-Value Query Start Query End
CE16 267 350 4.7e-21 115 341
No external refs found!