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  5. LOC_Os10g05600.1

LOC_Os10g05600.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g05600.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g05600.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_25
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_46


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin ProSiteProfiles 28 263
IPR001938 Thaumatin SMART 31 263
IPR001938 Thaumatin PRINTS 135 151
IPR001938 Thaumatin PRINTS 30 42
IPR001938 Thaumatin PANTHER 16 280
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 29 263
IPR001938 Thaumatin Pfam 35 263
IPR037176 Osmotin/thaumatin-like_sf Gene3D 29 263
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 390 1e-86 35 263
No external refs found!