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  5. LOC_Os10g21192.1

LOC_Os10g21192.1


Description : photosystem II reaction center protein A


Gene families : OG_01_0008235 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008235_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g21192.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94


Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISM GOs from InterProScan
BP GO:0009772 photosynthetic electron transport in photosystem II ISM GOs from InterProScan
BP GO:0019684 photosynthesis, light reaction ISM GOs from InterProScan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005867 PSII_D1 CDD 7 344
IPR000484 Photo_RC_L/M ProSitePatterns 191 217
IPR036854 Photo_II_D1/D2_sf Gene3D 4 187
IPR005867 PSII_D1 TIGRFAM 1 348
IPR000484 Photo_RC_L/M Pfam 28 327
IPR005867 PSII_D1 Hamap 1 347
IPR000484 Photo_RC_L/M PRINTS 109 137
IPR000484 Photo_RC_L/M PRINTS 197 223
IPR000484 Photo_RC_L/M PANTHER 43 328
IPR036854 Photo_II_D1/D2_sf SUPERFAMILY 11 343

No CAZYmes available for this sequence

No external refs found!