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  5. LOC_Os10g21250.1

LOC_Os10g21250.1


Description : Photosystem I, PsaA/PsaB protein


Gene families : OG_01_0005539 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005539_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g21250.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_621


Type GO Term Name Evidence Source
CC GO:0009579 thylakoid ISM GOs from InterProScan
BP GO:0015979 photosynthesis ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001280 PSI_PsaA/B Pfam 32 744
IPR001280 PSI_PsaA/B PRINTS 291 309
IPR001280 PSI_PsaA/B PRINTS 589 610
IPR001280 PSI_PsaA/B PRINTS 716 744
IPR001280 PSI_PsaA/B PRINTS 346 369
IPR001280 PSI_PsaA/B PRINTS 195 219
IPR001280 PSI_PsaA/B PRINTS 664 686
IPR001280 PSI_PsaA/B PRINTS 433 455
IPR001280 PSI_PsaA/B PRINTS 385 411
IPR001280 PSI_PsaA/B PRINTS 156 180
IPR001280 PSI_PsaA/B PRINTS 531 549
IPR001280 PSI_PsaA/B PRINTS 562 582
IPR001280 PSI_PsaA/B PRINTS 70 93
IPR001280 PSI_PsaA/B PIRSF 12 750
IPR020586 PSI_PsaA/B_CS ProSitePatterns 573 582
IPR036408 PSI_PsaA/B_sf SUPERFAMILY 26 748
IPR006243 PSI_PsaA TIGRFAM 1 750
IPR006243 PSI_PsaA Hamap 1 750
IPR036408 PSI_PsaA/B_sf Gene3D 1 750
IPR006243 PSI_PsaA PANTHER 1 725

No CAZYmes available for this sequence

No external refs found!