1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g21268.1

LOC_Os10g21268.1


Description : ribulose-bisphosphate carboxylases


Gene families : OG_01_0010725 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010725_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g21268.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g21268.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_79


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
BP GO:0015977 carbon fixation ISM GOs from InterProScan
MF GO:0016984 ribulose-bisphosphate carboxylase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020878 RuBisCo_large_chain_AS ProSitePatterns 203 211
IPR000685 RuBisCO_lsu_C Pfam 161 469
IPR033966 RuBisCO SFLD 20 471
IPR017443 RuBisCO_lsu_fd_N Pfam 31 151
IPR036422 RuBisCO_lsu_N_sf Gene3D 16 154
IPR020888 RuBisCO_lsuI CDD 30 480
IPR036376 RuBisCO_lsu_C_sf Gene3D 157 484
IPR036422 RuBisCO_lsu_N_sf SUPERFAMILY 16 156
IPR020888 RuBisCO_lsuI Hamap 16 482
IPR033966 RuBisCO PANTHER 1 480
IPR036376 RuBisCO_lsu_C_sf SUPERFAMILY 155 481

No CAZYmes available for this sequence

No external refs found!