LOC_Os10g21290.1

Description : photosynthetic electron transfer A

Gene families : OG_01_0017762 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017762_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g21290.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g21290.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_550

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0020037	heme binding	ISM	GOs from InterProScan
CC	GO:0031361	obsolete integral component of thylakoid membrane	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036826	Cyt_f_lg_dom_sf	SUPERFAMILY	36	285
IPR002325	Cyt_f	PRINTS	147	167
IPR002325	Cyt_f	PRINTS	168	188
IPR002325	Cyt_f	PRINTS	126	146
IPR002325	Cyt_f	PRINTS	44	63
IPR002325	Cyt_f	PRINTS	31	42
IPR002325	Cyt_f	PRINTS	301	318
IPR002325	Cyt_f	PRINTS	64	84
IPR002325	Cyt_f	PRINTS	259	279
IPR002325	Cyt_f	PRINTS	85	104
IPR002325	Cyt_f	PRINTS	189	212
IPR002325	Cyt_f	PRINTS	238	258
IPR002325	Cyt_f	PRINTS	280	300
IPR002325	Cyt_f	PRINTS	105	125
IPR036826	Cyt_f_lg_dom_sf	Gene3D	36	286
IPR024094	Cyt_f_lg_dom	Pfam	36	190
IPR024058	Cyt-f_TM	SUPERFAMILY	282	320
IPR002325	Cyt_f	ProSiteProfiles	35	320
IPR011054	Rudment_hybrid_motif	SUPERFAMILY	203	265
IPR002325	Cyt_f	Hamap	5	319
IPR002325	Cyt_f	Pfam	202	320

No CAZYmes available for this sequence

External Links

No external refs found!