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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0020521 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020521_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g21920.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g21920.1 | No neighbors in network |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 144 | 267 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 249 | 284 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 320 | 354 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 357 | 391 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 428 | 460 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 181 | 215 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 322 | 355 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 393 | 425 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 216 | 246 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 287 | 321 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 383 | 492 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 268 | 382 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 179 | 213 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 390 | 424 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 214 | 248 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 284 | 330 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 178 | 227 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 355 | 403 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 251 | 264 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 425 | 459 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 355 | 389 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 421 | 452 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 285 | 319 |
No CAZYmes available for this sequence
| No external refs found! |