LOC_Os10g22570.1

No description available

Gene families : OG_01_0006236 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006236_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os10g22570.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os10g22570.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_288
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_182

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0007015	actin filament organization	ISM	GOs from InterProScan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0051015	actin filament binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	ISM	GOs from InterProScan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	492	966
IPR001547	Glyco_hydro_5	Pfam	1150	1429
IPR001547	Glyco_hydro_5	Pfam	201	469
IPR001547	Glyco_hydro_5	Pfam	682	947
IPR018087	Glyco_hydro_5_CS	ProSitePatterns	797	806
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	972	1446
IPR010431	Fascin	PANTHER	9	488
IPR018087	Glyco_hydro_5_CS	ProSitePatterns	319	328
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	13	489
IPR008999	Actin-crosslinking	SUPERFAMILY	527	644
IPR008999	Actin-crosslinking	SUPERFAMILY	1008	1124
IPR008999	Actin-crosslinking	SUPERFAMILY	48	164
IPR010431	Fascin	PANTHER	972	1447
IPR010431	Fascin	PANTHER	489	965

No CAZYmes available for this sequence

External Links

No external refs found!